Here is a list of all files with brief descriptions:

src
native_runtime
c
native_app_config.c	Loads app-local runtime configuration and resolves app-relative override paths from local config and manifest data
native_app_config.h	Declares app-local runtime configuration helpers and the app-local configuration record
native_app_runtime_clone.c	Deep-copies AppRuntime structures so loaded runtime state can be duplicated safely
native_app_runtime_clone.h	Declares helpers for cloning AppRuntime values
native_app_runtime_finalize.c	Finalizes loaded app runtime records by applying serve overrides and resolving effective runtime paths
native_app_runtime_finalize.h	Declares helpers that finalize loaded app runtime configuration
native_app_runtime_paths.c	Finds app roots and computes default or effective build, state, base, log, debug, and error-report paths
native_app_runtime_paths.h	Declares helpers for locating app roots and deriving runtime paths
native_artifact_emit.c	Builds native app and website artifact metadata and emits JSON or HTML report payloads
native_artifact_emit.h	Declares helpers that build native artifact and report payload strings
native_backup_restore.c	Implements native backup and restore reporting for app state and sqlite snapshots
native_backup_restore.h	Declares native backup and restore report builders
native_barcode_decode.c
native_barcode_decode.h
native_barcode_runtime_ops.c
native_barcode_runtime_ops.h
native_connection.c	Wraps accepted sockets with transport metadata and provides connection IO and lifecycle helpers
native_connection.h	Declares the native connection abstraction and transport metadata helpers
native_dispatch_table.c	Matches API request paths against the dispatch table and resolves the response artifact file to serve
native_dispatch_table.h	Declares dispatch-table request path helpers
native_dynamic_config.c
native_dynamic_config.h	Declares Pharos-owned dynamic runtime config resolution helpers
native_dynamic_dispatch.c	Route dispatch for in-process dynamic-app request handling
native_dynamic_dispatch.h	Route dispatch for in-process dynamic-app request handling
native_dynamic_media.c	Serves static assets from the artifact directory for in-process dynamic-app request handling, and provides media mutation helpers for upload, delete, and path-resolution operations
native_dynamic_media.h	Media and static asset serving for in-process dynamic handling
native_dynamic_multipart.c	Pharos-owned multipart form-data parsing for in-process dynamic handling
native_dynamic_multipart.h	Pharos-owned multipart form-data parsing for in-process dynamic handling
native_dynamic_relational.c
native_dynamic_relational.h	Declares Pharos-owned native relational runtime helpers for dynamic apps
native_dynamic_request_fields.c	URL decoding, query-string parsing, and form-value extraction for in-process dynamic request handling
native_dynamic_request_fields.h	Request field extraction helpers for in-process dynamic handling
native_dynamic_runtime.c	In-process dynamic-app request handler for the Pharos native runtime
native_dynamic_runtime.h	In-process dynamic-app request handler for the Pharos native runtime
native_dynamic_template.h	Declares template rendering functions for the in-process dynamic runtime
native_fs.c	Provides filesystem helpers for directory creation, recursive copy or removal, and file writes
native_fs.h	Declares native filesystem helper routines
native_http_access_log.c	Implements native access log and error log helpers
native_http_access_log.h	Declares native access log and error log helpers
native_http_log.c	Supplies MIME lookup, status parsing, client IP extraction, and log-safe HTTP formatting helpers
native_http_log.h	Declares HTTP logging and response formatting helpers
native_http_request.c	Parses HTTP requests from native connections into method, target, header, cookie, and body fields
native_http_request.h	Declares the parsed HTTP request record and request parsing helpers
native_http_response.c	Implements native HTTP response writing helpers
native_http_response.h	Declares native HTTP response writing helpers
native_json_config.c	Provides lightweight JSON and conf value extraction helpers for manifests and config files
native_json_config.h	Declares lightweight JSON and conf value lookup helpers
native_json_runtime_ops.c
native_json_runtime_ops.h
native_listener.c	Opens the configured listener, manages cleanup registration, and reports the active serve endpoint
native_listener.h	Declares native listener state and socket lifecycle helpers
native_migrate_verify.c	Verifies sqlite migration state natively and emits structured migration verification reports
native_migrate_verify.h	Declares native migration verification entry points
native_ops_bridge.c	Bridges native ops commands to doctor, drift, deploy-check, and migration verification report generation
native_ops_bridge.h	Declares native bridge helpers for Pharos ops commands
native_process_capture.c	Runs child processes and captures their output, optionally with injected environment values
native_process_capture.h	Declares child-process capture helpers
native_request_path.c	Normalizes request targets by stripping query strings and remapping them under an app mount path
native_request_path.h	Declares request target normalization helpers
native_runtime_cleanup.c	Implements cleanup helpers for native runtime-owned data structures
native_runtime_cleanup.h	Declares cleanup helpers for native runtime-owned data structures
native_runtime_load.c	Loads AppRuntime values from the finalized artifact-local app manifest and validates required runtime fields
native_runtime_load.h	Declares helpers for loading native runtime metadata from manifests
native_runtime_reports.c	Serializes runtime-level and app-level build and status metadata into JSON report payloads
native_runtime_reports.h	Declares builders for native runtime report payloads
native_runtime_stack.c	Resolves the runtime apps directory, fingerprints it for reload detection, logs startup state, and matches requests to mounted apps
native_runtime_stack.h	Declares runtime stack helpers for app discovery, reload detection, and request matching
native_runtime_types.h	Defines shared native runtime data structures used across the Pharos C runtime
native_serve_config.c	Parses native serve CLI arguments and applies runtime-conf-derived defaults to ServeConfig
native_serve_config.h	Declares helpers for parsing and normalizing native serve configuration
native_shell_bridge.c	Invokes Pharos shell runtime, build, and status command surfaces for native callers
native_shell_bridge.h	Declares bridge helpers for invoking Pharos shell command surfaces
native_spawn_argv.c	Builds the argv vector used to launch an app entrypoint for an incoming HTTP request
native_spawn_argv.h	Declares argv construction helpers for spawned app requests
native_spawn_temp_body.c	Writes multipart request bodies to temporary files and removes them during cleanup
native_spawn_temp_body.h	Declares temporary request-body file helpers
native_static_serve.c	Implements native static artifact serving helpers
native_static_serve.h	Declares native static artifact serving helpers
native_support.c	Collects shared low-level helpers for buffers, strings, path manipulation, file reads, and simple path predicates
native_support.h	Declares shared low-level support helpers used across the Pharos native runtime
native_yyjson_helpers.c	Implements small reusable yyjson wrappers with explicit ownership and type checks for Pharos native runtime callers
native_yyjson_helpers.h	Declares shared helper wrappers around vendored yyjson parsing and serialization APIs
pharos_runtime.c	Native Pharos runtime entrypoint and orchestration for serve, runtime, website, and ops command flows
pharos_zxing_reader.c
pharos_zxing_reader.h
pharos_zxing_reader_cli.c
stb_image.h
ucal_static_server.c	Provides a minimal loopback static server for serving UCAL build artifacts and route-mapped files directly from a build root
yyjson.c
yyjson.h